chr1:157700500:C>A Detail (hg38) (FCRL3)

Information

Genome

Assembly Position
hg19 chr1:157,670,290-157,670,290 View the variant detail on this assembly version.
hg38 chr1:157,700,500-157,700,500

HGVS

Type Transcript Protein
RefSeq NM_052939.3:c.-11G>T
NM_001320333.1:c.-11G>T
Ensemble ENST00000368184.8:c.-11G>T
Summary

MGeND

Clinical significance
Variant entry
GWAS entry
Disease area statistics Show details

Frequency

JP HGVD:[No Data.]
ToMMo:[No Data.]
NCBN:[No Data.]
NCBN(Hondo):[No Data.]
NCBN(Ryukyu):[No Data.]
East asia ExAC:<0.001

Prediction

ClinVar

Clinical Significance
Review star [No Data.]
Show details
Links
Type Database ID Link
Gene MIM 606510 OMIM
HGNC 18506 HGNC
Ensembl ENSG00000160856 Ensembl
NCBI NCBI
Gene Cards Gene Cards
OncoKB OncoKB
Type Database ID Link
Variant TogoVar tgv302059764 TogoVar
COSMIC
MONDO
Disease area statistics
[No Data.]
MGeND
[No Data.]
ClinVar
[No Data.]
CIViC
[No Data.]
DisGeNET
Score Disease name Description Source Pubmed Links
<0.001 neuromyelitis optica The Fc Receptor-Like 3 Polymorphisms (rs7528684, rs945635, rs3761959 and rs22822... BeFree 26402798 Detail
Annotation

Annotations

DescrptionSourceLinks
The Fc Receptor-Like 3 Polymorphisms (rs7528684, rs945635, rs3761959 and rs2282284) and The Risk of ... DisGeNET Detail

Overlapped Transcript Coordinates

Gene Transcript ID Exon Number Chromosome Start Stop Type Amino Mutation Transcript Position Links

Overlapped Transcript

Gene Transcript ID Chromosome Start Stop Links
Gene
-
Genome
hg38
Position
chr1:157,700,500-157,700,500
Variant Type
snv
Reference Allele
C
Alternative Allele
A
East Asian Chromosome Counts (ExAC)
8600
East Asian Allele Counts (ExAC)
0
East Asian Heterozygous Counts (ExAC)
0
East Asian Homozygous Counts (ExAC)
0
East Asian Allele Frequency (ExAC)
0.0
Chromosome Counts in All Race (ExAC)
120922
Allele Counts in All Race (ExAC)
8
Heterozygous Counts in All Race (ExAC)
6
Homozygous Counts in All Race (ExAC)
0
Allele Frequency in All Race (ExAC)
6.615835001075073E-5
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